1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G172100.1

Seita.5G172100.1


Description : Unknown function


Gene families : OG_42_0000250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G172100.1
Cluster HCAA Clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
At5g37380 No alias AT5g37380/MNJ8_170 [Source:UniProtKB/TrEMBL;Acc:Q9FHS7] 0.03 Orthogroups_2024-Update
Kfl00092_0360 kfl00092_0360_v1.1 (at2g25560 : 98.6) DNAJ heat shock N-terminal... 0.01 Orthogroups_2024-Update
Solyc01g067780 No alias DnaJ domain-containing protein (AHRD V3.3 *** A0A103XIV0_CYNCS) 0.03 Orthogroups_2024-Update
Solyc03g111440 No alias DnaJ domain-containing protein (AHRD V3.3 *-* A0A103YAX8_CYNCS) 0.05 Orthogroups_2024-Update
Sopen03g029980 No alias Domain of unknown function (DUF3444) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR024593 DUF3444 817 1017
IPR024593 DUF3444 511 715
IPR001623 DnaJ_domain 66 127
No external refs found!