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  5. At4g25790

At4g25790


Description : At4g25790 [Source:UniProtKB/TrEMBL;Acc:Q9SW04]


Gene families : OG_42_0000094 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g25790
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
112379 No alias basic pathogenesis-related protein 1 0.02 Orthogroups_2024-Update
234874 No alias pathogenesis-related gene 1 0.02 Orthogroups_2024-Update
A4A49_42492 No alias basic form of pathogenesis-related protein 1 0.04 Orthogroups_2024-Update
At2g19990 No alias PR-1-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VRT6] 0.04 Orthogroups_2024-Update
At4g30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Orthogroups_2024-Update
At4g33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
At5g02730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Orthogroups_2024-Update
Bradi1g57590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Orthogroups_2024-Update
Brara.C04098.1 No alias CAPE precursor polypeptide 0.04 Orthogroups_2024-Update
Brara.J00054.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Glyma.13G251600 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Glyma.13G252000 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Glyma.13G252400 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Glyma.15G062700 No alias basic pathogenesis-related protein 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G106010.3 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
LOC_Os02g54570 No alias SCP-like extracellular protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g51680 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g03458 No alias SCP-like extracellular protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g03730 No alias SCP-like extracellular protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g14070 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
MA_102795g0010 No alias (q40374|pr1_medtr : 189.0) Pathogenesis-related protein... 0.04 Orthogroups_2024-Update
Potri.001G288400 No alias pathogenesis-related gene 1 0.03 Orthogroups_2024-Update
Potri.009G083600 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Pp1s297_72V6 No alias pathogenesis-related maize seed protein 0.03 Orthogroups_2024-Update
Solyc09g007020 No alias pathogenesis-related protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR014044 CAP_domain 79 198
No external refs found!