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  5. Seita.5G180000.1

Seita.5G180000.1


Description : clade H phosphatase


Gene families : OG_42_0000712 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.5G180000.1
Cluster HCAA Clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Bradi1g16810 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Bradi2g13820 No alias Protein phosphatase 2C family protein 0.05 Orthogroups_2024-Update
GRMZM2G135444 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G015470.3 No alias clade H phosphatase 0.02 Orthogroups_2024-Update
HORVU2Hr1G015480.1 No alias clade H phosphatase 0.02 Orthogroups_2024-Update
Mp2g17470.1 No alias clade H phosphatase 0.03 Orthogroups_2024-Update
Sopen00g009010 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update
Sopen04g032730 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 111 337
No external refs found!