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  5. At4g25890

At4g25890


Description : 60S acidic ribosomal protein P3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVZ6]


Gene families : OG_42_0007498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007498_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g25890
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
105823 No alias 60S acidic ribosomal protein family 0.02 Orthogroups_2024-Update
Brara.B01223.1 No alias component *(RPP3) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.J01152.1 No alias component *(RPP3) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Glyma.08G131500 No alias 60S acidic ribosomal protein family 0.03 Orthogroups_2024-Update
HORVU7Hr1G096990.2 No alias component *(RPP3) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00537_0100 kfl00537_0100_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Mp3g07010.1 No alias component RPP3 of LSU proteome component 0.02 Orthogroups_2024-Update
Potri.003G010200 No alias 60S acidic ribosomal protein family 0.05 Orthogroups_2024-Update
Potri.009G032600 No alias 60S acidic ribosomal protein family 0.05 Orthogroups_2024-Update
Pp1s167_19V6 No alias 60s acidic ribosomal protein p3 0.03 Orthogroups_2024-Update
Pp1s266_20V6 No alias 60s acidic ribosomal protein p3 0.03 Orthogroups_2024-Update
Seita.4G241800.1 No alias component *(RPP3) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.010G251600.1 No alias component *(RPP3) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Solyc07g009330 No alias Auxin induced-like protein (AHRD V3.3 *** E0Z5V6_PICSI) 0.09 Orthogroups_2024-Update
Sopen07g005080 No alias 60s Acidic ribosomal protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!