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At4g25960


Description : ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g25960
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
176522 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
A4A49_15329 No alias abc transporter b family member 20 0.03 Orthogroups_2024-Update
Bradi2g20177 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Brara.D02299.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Brara.J00114.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
GRMZM5G833207 No alias ATP binding cassette subfamily B4 0.04 Orthogroups_2024-Update
GRMZM5G891159 No alias P-glycoprotein 20 0.02 Orthogroups_2024-Update
Glyma.08G342600 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Glyma.17G041200 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
Glyma.17G259100 No alias P-glycoprotein 13 0.03 Orthogroups_2024-Update
HORVU2Hr1G080200.1 No alias auxin efflux transporter *(ABCB19) & subfamily ABCB transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G117180.29 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Pp1s252_67V6 No alias multidrug resistance protein 0.03 Orthogroups_2024-Update
Pp1s30_122V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Pp1s338_12V6 No alias multidrug pheromone mdr abc transporter family 0.03 Orthogroups_2024-Update
Seita.1G191000.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Seita.5G470000.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sopen02g032160 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000782 telomere cap complex IEP Predicted GO
CC GO:0000783 nuclear telomere cap complex IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
CC GO:1990879 CST complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 712 983
IPR011527 ABC1_TM_dom 79 349
IPR003439 ABC_transporter-like 420 568
IPR003439 ABC_transporter-like 1050 1197
No external refs found!