1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G205400.1

Seita.5G205400.1


Description : Qb-type VTI-group component of SNARE membrane fusion complex


Gene families : OG_42_0001748 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001748_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G205400.1
Cluster HCAA Clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Brara.D00969.1 No alias Qb-type VTI-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Kfl00071_0280 kfl00071_0280_v1.1 (at1g26670 : 165.0) member of VTI1 Gene Family. Normally... 0.02 Orthogroups_2024-Update
Sopen03g034740 No alias Vesicle transport v-SNARE protein N-terminus 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!