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  5. Seita.5G211700.1

Seita.5G211700.1


Description : LRR-domain extensin


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G211700.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
At4g13340 No alias Leucine-rich repeat extensin-like protein 3... 0.03 Orthogroups_2024-Update
Potri.006G162300 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Sobic.001G058300.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 261 316
No external refs found!