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  5. Seita.5G215300.1

Seita.5G215300.1


Description : Unknown function


Gene families : OG_42_0000451 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G215300.1
Cluster HCAA Clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Bradi1g21087 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g33570 No alias F-box family protein 0.08 Orthogroups_2024-Update
Bradi2g41170 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g55751 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G094100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g41340 No alias OsFBL1 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.008G094800.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 415 459
IPR001810 F-box_dom 70 107
No external refs found!