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  5. Seita.5G221300.1

Seita.5G221300.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G221300.1
Cluster HCAA Clusters: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
441717 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_31699 No alias pleiotropic drug resistance protein 2 0.02 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Kfl00175_0190 kfl00175_0190_v1.1 (at2g29940 : 809.0) pleiotropic drug resistance 3... 0.01 Orthogroups_2024-Update
LOC_Os02g32690 No alias pleiotropic drug resistance protein 15, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g16458 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
Seita.2G162400.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G254100.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sopen05g015600 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 736 800
IPR003439 ABC_transporter-like 889 1041
IPR003439 ABC_transporter-like 183 365
IPR013525 ABC_2_trans 519 730
IPR013525 ABC_2_trans 1187 1400
IPR029481 ABC_trans_N 107 157
No external refs found!