Seita.5G221600.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G221600.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
173584 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
415867 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
At1g15210 No alias PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4] 0.05 Orthogroups_2024-Update
At4g15230 No alias ABC transporter G family member 30... 0.03 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi4g28270 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Cre04.g224500 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
Cre16.g648700 No alias pleiotropic drug resistance 5 0.02 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
GRMZM2G421495 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.17G120100 No alias pleiotropic drug resistance 4 0.04 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.19G192900 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU5Hr1G106850.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g16449 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
MA_10427561g0010 No alias (q8gu88|pdr7_orysa : 1276.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
MA_10427683g0010 No alias (at1g59870 : 1105.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Mp1g25350.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00011269-RA No alias (q7fmw4|pdr15_orysa : 576.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
PSME_00017479-RA No alias (q5z9s8|pdr12_orysa : 1136.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00037776-RA No alias (at1g59870 : 665.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
Potri.001G049000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.001G251100 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
Potri.006G248500 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.010G153600 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Potri.018G074500 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.2G152000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.2G162400.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.9G283100.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100190 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 179 361
IPR003439 ABC_transporter-like 887 1039
IPR029481 ABC_trans_N 104 153
IPR013581 PDR_assoc 732 796
IPR013525 ABC_2_trans 515 726
IPR013525 ABC_2_trans 1184 1398
No external refs found!