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  5. Seita.5G239300.1

Seita.5G239300.1


Description : Unknown function


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G239300.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
At1g79180 No alias myb domain protein 63 [Source:TAIR;Acc:AT1G79180] 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.05 Orthogroups_2024-Update
Bradi3g58770 No alias myb domain protein 93 0.08 Orthogroups_2024-Update
GRMZM2G167088 No alias myb domain protein 101 0.03 Orthogroups_2024-Update
Glyma.10G139000 No alias myb domain protein 61 0.04 Orthogroups_2024-Update
HORVU5Hr1G022690.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g36890 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g35660 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G209100.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Seita.6G158000.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.05 Orthogroups_2024-Update
Seita.9G074800.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G196000.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G055700.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 112
IPR001005 SANT/Myb 16 63
No external refs found!