1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G241500.1

Seita.5G241500.1


Description : auxin efflux transporter *(PIN) & auxin transporter *(PIN)


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G241500.1
Cluster HCAA Clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
234325 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
A4A49_02382 No alias auxin efflux carrier component 3 0.03 Orthogroups_2024-Update
A4A49_06506 No alias auxin efflux carrier component 3 0.04 Orthogroups_2024-Update
A4A49_14887 No alias auxin efflux carrier component 1 0.03 Orthogroups_2024-Update
A4A49_27140 No alias auxin efflux carrier component 2 0.03 Orthogroups_2024-Update
At5g57090 No alias Auxin efflux carrier component 2... 0.03 Orthogroups_2024-Update
Bradi3g59520 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Brara.B01244.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.03 Orthogroups_2024-Update
Brara.J01877.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.04 Orthogroups_2024-Update
Brara.J01982.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.03 Orthogroups_2024-Update
LOC_Os02g50960 No alias auxin efflux carrier component, putative, expressed 0.03 Orthogroups_2024-Update
MA_100472g0010 No alias (at1g70940 : 793.0) A regulator of auxin efflux and... 0.03 Orthogroups_2024-Update
Mp6g07950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Orthogroups_2024-Update
PSME_00020548-RA No alias (at5g57090 : 686.0) Encodes an auxin efflux carrier that... 0.04 Orthogroups_2024-Update
PSME_00040058-RA No alias (at5g57090 : 363.0) Encodes an auxin efflux carrier that... 0.03 Orthogroups_2024-Update
PSME_00048141-RA No alias (at5g57090 : 409.0) Encodes an auxin efflux carrier that... 0.02 Orthogroups_2024-Update
Potri.002G072200 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Potri.004G124200 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Potri.017G078300 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
Potri.018G139400 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Seita.4G101300.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Seita.8G021700.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 612
No external refs found!