Seita.5G241600.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.5G241600.1
Cluster	HCAA Clusters: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
At5g06710	No alias	Homeobox-leucine zipper protein HAT14...	0.04	Orthogroups_2024-Update
GRMZM2G047715	No alias	homeobox from Arabidopsis thaliana	0.03	Orthogroups_2024-Update
HORVU3Hr1G000250.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G049790.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G098230.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
MA_194299g0010	No alias	(at5g06710 : 199.0) Homeobox-leucine zipper protein.;...	0.04	Orthogroups_2024-Update
PSME_00018809-RA	No alias	(at5g06710 : 140.0) Homeobox-leucine zipper protein.;...	0.02	Orthogroups_2024-Update
PSME_00022003-RA	No alias	(at4g37790 : 231.0) Encodes homeobox protein HAT22,...	0.03	Orthogroups_2024-Update
PSME_00028375-RA	No alias	(at5g06710 : 210.0) Homeobox-leucine zipper protein.;...	0.02	Orthogroups_2024-Update
PSME_00038042-RA	No alias	(at5g06710 : 121.0) Homeobox-leucine zipper protein.;...	0.05	Orthogroups_2024-Update
Pp1s203_33V6	No alias	homeobox-leucine zipper protein	0.03	Orthogroups_2024-Update
Pp1s41_32V6	No alias	homeobox-leucine zipper protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0009916	alternative oxidase activity	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	131	164
IPR001356	Homeobox_dom	76	129

External Links

No external refs found!

Seita.5G241600.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation