1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G263600.1

Seita.5G263600.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G263600.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
55113 No alias FASCICLIN-like arabinogalactan protein 8 0.04 Orthogroups_2024-Update
A4A49_28632 No alias fasciclin-like arabinogalactan protein 12 0.02 Orthogroups_2024-Update
At1g03870 No alias At1g03870 [Source:UniProtKB/TrEMBL;Acc:B3LF88] 0.02 Orthogroups_2024-Update
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.06 Orthogroups_2024-Update
Bradi2g16570 No alias FASCICLIN-like arabinogalactan-protein 11 0.05 Orthogroups_2024-Update
Bradi2g34650 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Bradi2g46120 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Brara.C00098.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Brara.I01827.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Brara.J00216.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Glyma.11G156513 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Glyma.12G207600 No alias FASCICLIN-like arabinoogalactan 9 0.05 Orthogroups_2024-Update
HORVU3Hr1G061130.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
LOC_Os01g06580 No alias fasciclin domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g47780 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g20540 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.001G320800 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Potri.013G151432 No alias FASCICLIN-like arabinogalactan-protein 12 0.02 Orthogroups_2024-Update
Potri.013G151500 No alias FASCICLIN-like arabinogalactan-protein 12 0.03 Orthogroups_2024-Update
Potri.019G093300 No alias FASCICLIN-like arabinogalactan 6 0.05 Orthogroups_2024-Update
Sobic.009G232100.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 47 185
No external refs found!