Description : ARF-type transcription factor
Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.5G265200.1 | |
Cluster | HCAA Clusters: Cluster_115 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.D02066.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
GRMZM2G073750 | No alias | auxin response factor 6 | 0.03 | Orthogroups_2024-Update | |
Glyma.06G265460 | No alias | auxin response factor 6 | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G033820.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G096460.13 | No alias | ARF-type transcription factor & auxin signal mediator... | 0.03 | Orthogroups_2024-Update | |
MA_10432580g0010 | No alias | (at5g62000 : 779.0) Encodes an auxin response factor.... | 0.03 | Orthogroups_2024-Update | |
PSME_00021251-RA | No alias | (at5g60450 : 318.0) Encodes a member of the ARF family... | 0.03 | Orthogroups_2024-Update | |
PSME_00035612-RA | No alias | (at4g30080 : 576.0) Involved in root cap cell... | 0.03 | Orthogroups_2024-Update | |
Potri.006G138500 | No alias | Transcriptional factor B3 family protein /... | 0.02 | Orthogroups_2024-Update | |
Sobic.008G169400.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sopen07g023180 | No alias | Auxin response factor | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
CC | GO:0005634 | nucleus | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
BP | GO:0009725 | response to hormone | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0004312 | fatty acid synthase activity | IEP | Predicted GO |
MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006996 | organelle organization | IEP | Predicted GO |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
No external refs found! |