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  5. Seita.5G268000.1

Seita.5G268000.1


Description : RopGEF guanine nucleotide exchange factor *(PRONE)


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G268000.1
Cluster HCAA Clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
Bradi2g54980 No alias RHO guanyl-nucleotide exchange factor 7 0.03 Orthogroups_2024-Update
Bradi5g18137 No alias RHO guanyl-nucleotide exchange factor 3 0.02 Orthogroups_2024-Update
Glyma.09G191900 No alias RHO guanyl-nucleotide exchange factor 8 0.02 Orthogroups_2024-Update
HORVU1Hr1G053350.5 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
LOC_Os01g55520 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g38000 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.05 Orthogroups_2024-Update
Seita.3G221100.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.01 Orthogroups_2024-Update
Sobic.001G305300.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Sobic.004G123100.2 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Solyc08g075120 No alias Rop guanine nucleotide exchange factor, putative (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 94 438
No external refs found!