Seita.5G271000.1


Description : component *(eL43) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001690_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G271000.1
Cluster HCAA Clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Bradi2g17040 No alias Zinc-binding ribosomal protein family protein 0.03 Orthogroups_2024-Update
Cre06.g257150 No alias Zinc-binding ribosomal protein family protein 0.04 Orthogroups_2024-Update
Glyma.11G039200 No alias Zinc-binding ribosomal protein family protein 0.05 Orthogroups_2024-Update
HORVU7Hr1G081910.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Mp5g08340.1 No alias component RPL37a of LSU proteome component 0.04 Orthogroups_2024-Update
Mp5g09590.1 No alias component RPL37a of LSU proteome component 0.05 Orthogroups_2024-Update
PSME_00003753-RA No alias (q5qm99|rl37a_orysa : 183.0) 60S ribosomal protein L37a... 0.02 Orthogroups_2024-Update
PSME_00039252-RA No alias (q5qm99|rl37a_orysa : 183.0) 60S ribosomal protein L37a... 0.02 Orthogroups_2024-Update
PSME_00044091-RA No alias (q5qm99|rl37a_orysa : 183.0) 60S ribosomal protein L37a... 0.02 Orthogroups_2024-Update
Pp1s200_49V6 No alias 60s ribosomal protein l37a 0.03 Orthogroups_2024-Update
Pp1s2_289V6 No alias 60s ribosomal protein l37a 0.03 Orthogroups_2024-Update
Pp1s39_288V6 No alias 60s ribosomal protein l37a 0.03 Orthogroups_2024-Update
Pp1s76_74V6 No alias 60s ribosomal protein l37a 0.04 Orthogroups_2024-Update
Sobic.004G045400.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.006G047400.1 No alias component *(eL43) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Solyc08g007140 No alias 60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI) 0.03 Orthogroups_2024-Update
Solyc08g077720 No alias 60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI) 0.03 Orthogroups_2024-Update
Sopen08g003090 No alias Ribosomal L37ae protein family 0.04 Orthogroups_2024-Update
Sopen08g026220 No alias Ribosomal L37ae protein family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR002674 Ribosomal_L37ae 4 88
No external refs found!