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  5. At4g26650

At4g26650


Description : AT4g26650/T15N24_100 [Source:UniProtKB/TrEMBL;Acc:Q8W569]


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g26650
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_26878 No alias rna-binding protein 1 0.04 Orthogroups_2024-Update
Brara.B02995.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.I01999.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.10G189500 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G008280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_36839g0020 No alias (at3g07810 : 140.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
PSME_00002580-RA No alias (at3g07810 : 236.0) RNA-binding (RRM/RBD/RNP motifs)... 0.01 Orthogroups_2024-Update
PSME_00023415-RA No alias (at5g40490 : 216.0) RNA-binding (RRM/RBD/RNP motifs)... 0.04 Orthogroups_2024-Update
PSME_00041420-RA No alias (at5g40490 : 199.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
PSME_00045317-RA No alias (at3g13224 : 253.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
Sobic.002G355300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g006180 No alias RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) 0.03 Orthogroups_2024-Update
Solyc12g014600 No alias RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) 0.03 Orthogroups_2024-Update
Sopen07g023790 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen07g024450 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen11g007210 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032048 cardiolipin metabolic process IEP Predicted GO
BP GO:0032049 cardiolipin biosynthetic process IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0046471 phosphatidylglycerol metabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
MF GO:0070567 cytidylyltransferase activity IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 124 181
IPR000504 RRM_dom 17 84
No external refs found!