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  5. Seita.5G276900.1

Seita.5G276900.1


Description : iron cation sensor protein *(HRZ/BRUTUS) & E3 ubiquitin ligase *(BTS/BTSL)


Gene families : OG_42_0002047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G276900.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Sopen03g038180 No alias Hemerythrin HHE cation binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR039512 RCHY1_zinc-ribbon 1155 1212
IPR008913 Znf_CHY 979 1054
IPR012312 Haemerythrin-like 636 797
IPR012312 Haemerythrin-like 287 419
IPR012312 Haemerythrin-like 42 168
No external refs found!