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  5. Seita.5G278900.1

Seita.5G278900.1


Description : Unknown function


Gene families : OG_42_0000430 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000430_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G278900.1
Cluster HCAA Clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
At5g38160 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Bradi2g17530 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Bradi5g25040 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Brara.I01526.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g49190 No alias LTPL154 - Protease inhibitor/seed storage/LTP family... 0.03 Orthogroups_2024-Update
Potri.017G118700 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Sobic.001G200900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g119210 No alias Lipid transfer protein (AHRD V3.3 *** S4TID2_GOSHI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 15 93
No external refs found!