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  5. Seita.5G279000.1

Seita.5G279000.1


Description : ER-tubule curvature-inducing protein *(Reticulon)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G279000.1
Cluster HCAA Clusters: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G031308 No alias VIRB2-interacting protein 1 0.01 Orthogroups_2024-Update
Glyma.05G212800 No alias VIRB2-interacting protein 2 0.03 Orthogroups_2024-Update
HORVU1Hr1G083110.6 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
PSME_00019330-RA No alias (at4g11220 : 250.0) VIRB2-interacting protein 2 (BTI2);... 0.01 Orthogroups_2024-Update
PSME_00042713-RA No alias (at3g10915 : 156.0) Reticulon family protein; INVOLVED... 0.01 Orthogroups_2024-Update
Seita.2G029000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.01 Orthogroups_2024-Update
Seita.5G309800.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sopen07g023440 No alias Reticulon 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 33 187
No external refs found!