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  5. Seita.5G283700.1

Seita.5G283700.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G283700.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At1g10680 No alias ABC transporter B family member 10... 0.02 Orthogroups_2024-Update
Bradi2g47337 No alias ATP binding cassette subfamily B4 0.04 Orthogroups_2024-Update
Brara.D02245.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F03152.1 No alias subfamily ABCB transporter 0.01 Orthogroups_2024-Update
Brara.G00386.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Brara.I00328.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
GRMZM2G085236 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
Glyma.13G119000 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
Glyma.19G184300 No alias ATP binding cassette subfamily B1 0.02 Orthogroups_2024-Update
LOC_Os01g18670 No alias MDR-like ABC transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38570 No alias multidrug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00006916-RA No alias (at1g02520 : 643.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00031965-RA No alias (q6yuu5|mdr_orysa : 1268.0) Putative multidrug... 0.02 Orthogroups_2024-Update
PSME_00039347-RA No alias (at1g02520 : 802.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00042040-RA No alias (at3g28345 : 1318.0) ABC transporter family protein;... 0.03 Orthogroups_2024-Update
Potri.001G139600 No alias P-glycoprotein 2 0.02 Orthogroups_2024-Update
Potri.002G019600 No alias P-glycoprotein 13 0.04 Orthogroups_2024-Update
Potri.002G187400 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Potri.003G094400 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Potri.010G003000 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Potri.014G113500 No alias P-glycoprotein 21 0.03 Orthogroups_2024-Update
Potri.017G081100 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
Potri.018G141400 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Pp1s28_282V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Seita.1G145300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.3G054200.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sobic.003G267100.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.003G267300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.004G073400.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.004G274600.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sopen03g024530 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen11g027010 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen12g033620 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1043 1190
IPR003439 ABC_transporter-like 388 536
IPR011527 ABC1_TM_dom 701 972
IPR011527 ABC1_TM_dom 47 319
No external refs found!