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  5. Seita.5G286200.1

Seita.5G286200.1


Description : MYB class-R2R3 subgroup-13 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G286200.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.03 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.02 Orthogroups_2024-Update
Bradi2g47590 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Brara.F00557.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.05 Orthogroups_2024-Update
Brara.F00610.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
Brara.I00330.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
GRMZM5G833253 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.15G025500 No alias myb domain protein 26 0.05 Orthogroups_2024-Update
Glyma.18G230600 No alias myb domain protein 17 0.04 Orthogroups_2024-Update
HORVU1Hr1G008810.3 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
LOC_Os05g41166 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
MA_8206949g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.03 Orthogroups_2024-Update
PSME_00005364-RA No alias (at1g22640 : 189.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00023733-RA No alias (at1g22640 : 175.0) MYB-type transcription factor (MYB3)... 0.05 Orthogroups_2024-Update
PSME_00031159-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00031160-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00031964-RA No alias (at4g13480 : 184.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00032477-RA No alias (at1g66230 : 167.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
Potri.001G036000 No alias myb domain protein 65 0.04 Orthogroups_2024-Update
Potri.010G114000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.012G072500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.06 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.04 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Solyc09g090130 No alias R2R3MYB transcription factor 15 0.04 Orthogroups_2024-Update
Sopen06g028000 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen09g033040 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 71 115
IPR001005 SANT/Myb 18 65
No external refs found!