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  5. Solyc03g111640

Solyc03g111640


Description : Programmed cell death 4 (AHRD V3.3 *** A0A0B0N0N9_GOSAR)


Gene families : OG_42_0001101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g111640
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
At5g63190 No alias MA3 domain-containing protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 135 245
IPR003891 Initiation_fac_eIF4g_MI 598 704
IPR003891 Initiation_fac_eIF4g_MI 434 543
IPR003891 Initiation_fac_eIF4g_MI 299 409
No external refs found!