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  5. Seita.5G299300.1

Seita.5G299300.1


Description : substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0006796 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006796_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.5G299300.1
Cluster HCAA Clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G217800 No alias Function unknown 0.04 Orthogroups_2024-Update
Mp1g27710.1 No alias Uncharacterized protein At4g10930 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Solyc12g055910 No alias RING/U-box protein (AHRD V3.3 *** A0A072TWI2_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 145 184
IPR001841 Znf_RING 31 71
IPR031736 EloA-BP1 812 912
No external refs found!