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  5. Seita.5G302700.1

Seita.5G302700.1


Description : Unknown function


Gene families : OG_42_0007852 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007852_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G302700.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G145900 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
Solyc08g066570 No alias Regulator of chromosome condensation (RCC1) family... 0.02 Orthogroups_2024-Update
Sopen08g020410 No alias Regulator of chromosome condensation (RCC1) repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 80 147
IPR000408 Reg_chr_condens 21 77
IPR000408 Reg_chr_condens 275 322
IPR000408 Reg_chr_condens 215 263
IPR000408 Reg_chr_condens 326 386
No external refs found!