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  5. Seita.5G309600.1

Seita.5G309600.1


Description : Unknown function


Gene families : OG_42_0000822 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000822_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G309600.1
Cluster HCAA Clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At3g54200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Orthogroups_2024-Update
HORVU4Hr1G023480.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Potri.016G142200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update
Seita.9G188900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 128 227
No external refs found!