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  5. Seita.5G309800.1

Seita.5G309800.1


Description : ER-tubule curvature-inducing protein *(Reticulon)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G309800.1
Cluster HCAA Clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Brara.A03496.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Brara.E00160.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Brara.H01657.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Brara.I00058.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
GRMZM2G031308 No alias VIRB2-interacting protein 1 0.04 Orthogroups_2024-Update
Glyma.05G212800 No alias VIRB2-interacting protein 2 0.06 Orthogroups_2024-Update
Glyma.08G019300 No alias VIRB2-interacting protein 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G064240.2 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.04 Orthogroups_2024-Update
HORVU3Hr1G069970.5 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.04 Orthogroups_2024-Update
HORVU7Hr1G075700.2 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
MA_10432084g0010 No alias (at3g10915 : 152.0) Reticulon family protein; INVOLVED... 0.03 Orthogroups_2024-Update
Mp6g03260.1 No alias ER-associated protein (Reticulon) 0.02 Orthogroups_2024-Update
PSME_00019330-RA No alias (at4g11220 : 250.0) VIRB2-interacting protein 2 (BTI2);... 0.03 Orthogroups_2024-Update
PSME_00042713-RA No alias (at3g10915 : 156.0) Reticulon family protein; INVOLVED... 0.02 Orthogroups_2024-Update
Seita.2G029000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Seita.5G279000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sopen12g002240 No alias Reticulon 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006084 acetyl-CoA metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006637 acyl-CoA metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0035383 thioester metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 73 227
No external refs found!