1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G311800.1

Seita.5G311800.1


Description : profilin actin nucleation protein


Gene families : OG_42_0000817 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G311800.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi2g49340 No alias profilin 5 0.02 Orthogroups_2024-Update
Brara.K01263.1 No alias profilin actin nucleation protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G075570.2 No alias profilin actin nucleation protein 0.01 Orthogroups_2024-Update
Mp6g13930.1 No alias profilin actin nucleation protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
InterPro domains Description Start Stop
IPR005455 PFN 1 130
No external refs found!