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  5. Seita.5G313000.1

Seita.5G313000.1


Description : mRNA-translocation factor *(eEF2))


Gene families : OG_42_0001704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G313000.1
Cluster HCAA Clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AC203173.3_FG004 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 Orthogroups_2024-Update
Bradi3g44160 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 Orthogroups_2024-Update
Bradi3g44175 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 Orthogroups_2024-Update
Brara.B03590.1 No alias mRNA-translocation factor *(eEF2)) 0.04 Orthogroups_2024-Update
Kfl00080_0090 kfl00080_0090_v1.1 (at1g56070 : 1415.0) encodes a translation elongation... 0.02 Orthogroups_2024-Update
MA_10426758g0020 No alias (o23755|ef2_betvu : 816.0) Elongation factor 2 (EF-2) -... 0.03 Orthogroups_2024-Update
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.02 Orthogroups_2024-Update
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.02 Orthogroups_2024-Update
PSME_00043108-RA No alias (at1g56070 : 1512.0) encodes a translation elongation... 0.04 Orthogroups_2024-Update
Sobic.003G291500.1 No alias mRNA-translocation factor *(eEF2)) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 18 342
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR000640 EFG_V-like 724 811
IPR004161 EFTu-like_2 394 467
No external refs found!