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  5. Seita.5G319100.1

Seita.5G319100.1


Description : catalytic component *(CesA) of cellulose synthase complex


Gene families : OG_42_0000159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G319100.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
75715 No alias Cellulose synthase family protein 0.04 Orthogroups_2024-Update
A4A49_22443 No alias cellulose synthase a catalytic subunit 8 [udp-forming] 0.03 Orthogroups_2024-Update
At4g18780 No alias Cellulose synthase (Fragment)... 0.03 Orthogroups_2024-Update
At5g17420 No alias Cellulose synthase (Fragment)... 0.03 Orthogroups_2024-Update
At5g44030 No alias cellulose synthase A4 [Source:TAIR;Acc:AT5G44030] 0.02 Orthogroups_2024-Update
Bradi2g49912 No alias cellulose synthase family protein 0.04 Orthogroups_2024-Update
Bradi3g28350 No alias cellulose synthase A4 0.06 Orthogroups_2024-Update
Bradi4g30540 No alias Cellulose synthase family protein 0.06 Orthogroups_2024-Update
Brara.F03770.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.05 Orthogroups_2024-Update
GRMZM2G027723 No alias cellulose synthase 1 0.03 Orthogroups_2024-Update
GRMZM2G104092 No alias cellulose synthase 1 0.02 Orthogroups_2024-Update
GRMZM2G111642 No alias Cellulose synthase family protein 0.02 Orthogroups_2024-Update
Glyma.12G096900 No alias cellulose synthase-like B3 0.03 Orthogroups_2024-Update
Glyma.12G191500 No alias cellulose synthase-like B4 0.03 Orthogroups_2024-Update
Glyma.12G191700 No alias cellulose synthase-like B3 0.04 Orthogroups_2024-Update
Glyma.13G126000 No alias cellulose synthase A4 0.02 Orthogroups_2024-Update
Glyma.16G165900 No alias cellulose synthase 6 0.03 Orthogroups_2024-Update
PSME_00003324-RA No alias (at5g44030 : 1405.0) Encodes a cellulose synthase... 0.03 Orthogroups_2024-Update
PSME_00003722-RA No alias (at4g18780 : 1327.0) Encodes a member of the cellulose... 0.02 Orthogroups_2024-Update
PSME_00015179-RA No alias (at5g17420 : 1472.0) Encodes a xylem-specific cellulose... 0.03 Orthogroups_2024-Update
Potri.002G257900 No alias cellulose synthase A4 0.04 Orthogroups_2024-Update
Potri.004G059600 No alias cellulose synthase family protein 0.04 Orthogroups_2024-Update
Potri.006G181900 No alias Cellulose synthase family protein 0.04 Orthogroups_2024-Update
Potri.013G019800 No alias cellulose synthase A9 0.03 Orthogroups_2024-Update
Seita.2G099400.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.04 Orthogroups_2024-Update
Sobic.001G224300.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.07 Orthogroups_2024-Update
Sobic.002G205500.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.07 Orthogroups_2024-Update
Sobic.003G296400.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.07 Orthogroups_2024-Update
Sobic.010G183700.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.03 Orthogroups_2024-Update
Solyc04g072790 No alias Cellulose synthase (AHRD V3.3 *** M1AK99_SOLTU) 0.03 Orthogroups_2024-Update
Solyc08g061100 No alias Cellulose synthase (AHRD V3.3 *** M1BV52_SOLTU) 0.02 Orthogroups_2024-Update
Solyc09g072820 No alias Cellulose synthase (AHRD V3.3 *** M5VVD4_PRUPE) 0.06 Orthogroups_2024-Update
Sopen07g025410 No alias Cellulose synthase 0.02 Orthogroups_2024-Update
Sopen08g006390 No alias Cellulose synthase 0.02 Orthogroups_2024-Update
Sopen09g028610 No alias Cellulose synthase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA 16Dec
BP GO:0030244 cellulose biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 261 970
No external refs found!