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  5. Seita.5G321400.1

Seita.5G321400.1


Description : protein involved in PS-II assembly *(HCF243/PAP90)


Gene families : OG_42_0007222 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G321400.1
Cluster HCAA Clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
At3g15095 No alias Chloroplast protein HCF243 [Source:UniProtKB/TrEMBL;Acc:Q9LIM5] 0.03 Orthogroups_2024-Update
Glyma.12G227300 No alias Function unknown 0.04 Orthogroups_2024-Update
Potri.011G097700 No alias Function unknown 0.03 Orthogroups_2024-Update
Solyc07g062730 No alias LOW QUALITY:Serine/Threonine-kinase pakA-like protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!