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  5. Seita.5G322500.1

Seita.5G322500.1


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G322500.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Brara.B01709.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02582.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H00144.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00447.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G458087 No alias J-domain protein 6 0.02 Orthogroups_2024-Update
Glyma.13G292500 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Glyma.19G044400 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g55100 No alias slTCP3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g51310 No alias TCP family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g33530 No alias TCP family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.015G050500 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Potri.T146100 No alias plastid transcription factor 1 0.02 Orthogroups_2024-Update
Sobic.003G299700.1 No alias TCP-type transcription factor 0.06 Orthogroups_2024-Update
Sobic.009G195000.2 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g016040 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Sopen02g033790 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 104 211
No external refs found!