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  5. Seita.5G324500.1

Seita.5G324500.1


Description : PEP carboxylase *(PPC) & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0000687 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G324500.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G091000 No alias phosphoenolpyruvate carboxylase 4 0.03 Orthogroups_2024-Update
Mp8g17440.1 No alias PEP carboxylase 0.01 Orthogroups_2024-Update
Pp1s83_144V6 No alias phosphoenolpyruvate carboxylase 0.03 Orthogroups_2024-Update
Sopen07g027150 No alias Phosphoenolpyruvate carboxylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA 16Dec
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA 16Dec
BP GO:0015977 carbon fixation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR021135 PEP_COase 39 969
No external refs found!