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  5. Seita.5G326400.1

Seita.5G326400.1


Description : regulatory factor *(CURT) of thylakoid grana stacking


Gene families : OG_42_0000658 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G326400.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
A4A49_07707 No alias protein curvature thylakoid 1a, chloroplastic 0.03 Orthogroups_2024-Update
At2g46820 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi1g43950 No alias Function unknown 0.08 Orthogroups_2024-Update
Glyma.07G019400 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.07G049000 No alias photosystem I P subunit 0.03 Orthogroups_2024-Update
Glyma.07G060700 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.16G029300 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.19G260600 No alias photosystem I P subunit 0.03 Orthogroups_2024-Update
HORVU1Hr1G051700.6 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.04 Orthogroups_2024-Update
HORVU7Hr1G042160.3 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
Kfl00031_0420 kfl00031_0420_v1.1 (at4g01150 : 151.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
LOC_Os06g15400 No alias expressed protein 0.02 Orthogroups_2024-Update
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 Orthogroups_2024-Update
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.02 Orthogroups_2024-Update
PSME_00000064-RA No alias (at4g01150 : 105.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.002G180400 No alias photosystem I P subunit 0.03 Orthogroups_2024-Update
Potri.003G052200 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.014G093900 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s212_34V6 No alias threonine endopeptidase 0.02 Orthogroups_2024-Update
Sobic.002G297300.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.06 Orthogroups_2024-Update
Sobic.010G109500.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
Sopen06g024890 No alias CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 0.03 Orthogroups_2024-Update
Sopen10g005560 No alias CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025564 CAAD_dom 62 145
No external refs found!