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  5. Seita.5G331000.1

Seita.5G331000.1


Description : 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G331000.1
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
At4g16590 No alias cellulose synthase-like A01 [Source:TAIR;Acc:AT4G16590] 0.03 Orthogroups_2024-Update
Bradi1g07277 No alias Cellulose-synthase-like C12 0.04 Orthogroups_2024-Update
Bradi3g06740 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
Brara.D00719.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
Brara.I04464.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU4Hr1G000610.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.02 Orthogroups_2024-Update
PSME_00004636-RA No alias (at5g03760 : 500.0) encodes a beta-mannan synthase that... 0.03 Orthogroups_2024-Update
Potri.005G146900 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
Potri.006G116900 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.03 Orthogroups_2024-Update
Pp1s162_130V6 No alias cellulose synthase-like glycosyltransferase family 2 0.04 Orthogroups_2024-Update
Pp1s164_5V6 No alias cellulose synthase-like glycosyltransferase family 2 0.03 Orthogroups_2024-Update
Pp1s224_44V6 No alias cellulose synthase-like glycosyltransferase family 2 0.02 Orthogroups_2024-Update
Pp1s36_62V6 No alias cellulose synthase-like A2, glycosyltransferase family 2... 0.03 Orthogroups_2024-Update
Pp1s65_194V6 No alias cellulose synthase-like A1, glycosyltransferase family 2... 0.02 Orthogroups_2024-Update
Seita.2G211800.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.06 Orthogroups_2024-Update
Solyc04g077470 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASJ1_POPTO) 0.04 Orthogroups_2024-Update
Solyc05g055410 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!