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  5. Seita.5G331200.1

Seita.5G331200.1


Description : nuclear lamina lamin-like protein *(CRWN)


Gene families : OG_42_0001967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G331200.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
A4A49_16931 No alias protein crowded nuclei 4 0.03 Orthogroups_2024-Update
Glyma.05G109300 No alias little nuclei4 0.03 Orthogroups_2024-Update
Mp3g21160.1 No alias CRWN nuclear lamina lamin-like protein 0.02 Orthogroups_2024-Update
Sobic.003G308200.1 No alias nuclear lamina lamin-like protein *(CRWN) 0.06 Orthogroups_2024-Update
Sopen03g009490 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!