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  5. Seita.5G332600.1

Seita.5G332600.1


Description : EC_4.1 carbon-carbon lyase


Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G332600.1
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
89475 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update
At2g20340 No alias Tyrosine decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY79] 0.02 Orthogroups_2024-Update
Bradi2g51120 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update
Brara.G00044.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
HORVU2Hr1G114390.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
Seita.8G209800.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.05 Orthogroups_2024-Update
Sobic.001G255300.1 No alias aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Sobic.009G192600.1 No alias aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Solyc07g054280 No alias Tyrosine decarboxylase (AHRD V3.3 *** Q000T5_ARICO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA 16Dec
BP GO:0019752 carboxylic acid metabolic process IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 84 152
No external refs found!