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  5. Seita.5G334700.1

Seita.5G334700.1


Description : component *(DRB4) of DRB4-DRB7.1 siRNA biogenesis regulator complex


Gene families : OG_42_0000831 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G334700.1
Cluster HCAA Clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G145900 No alias dsRNA-binding protein 2 0.03 Orthogroups_2024-Update
HORVU1Hr1G021530.1 No alias regulatory protein *(DRB2) of miRNA biogenesis pathway 0.02 Orthogroups_2024-Update
HORVU5Hr1G076910.3 No alias regulatory protein *(DRB2) of miRNA biogenesis pathway 0.04 Orthogroups_2024-Update
MA_10152247g0010 No alias (at2g28380 : 91.7) Encodes a cytoplasmic dsRNA-binding... 0.03 Orthogroups_2024-Update
MA_79750g0010 No alias (at5g41070 : 262.0) Encodes a double-stranded RNA... 0.04 Orthogroups_2024-Update
Mp3g18950.1 No alias Double-stranded RNA-binding protein 5 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
Seita.3G037300.1 No alias regulatory protein *(DRB2) of miRNA biogenesis pathway 0.04 Orthogroups_2024-Update
Solyc01g056620 No alias Double-stranded RNA binding protein (AHRD V3.3 *-* A9TDF6_PHYPA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 178 242
IPR014720 dsRBD_dom 3 69
IPR014720 dsRBD_dom 95 158
No external refs found!