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  5. Seita.5G337100.1

Seita.5G337100.1


Description : circadian clock repression factor *(TZP)


Gene families : OG_42_0007288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G337100.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Bradi2g51500 No alias zinc knuckle (CCHC-type) family protein 0.07 Orthogroups_2024-Update
Glyma.01G234600 No alias zinc knuckle (CCHC-type) family protein 0.02 Orthogroups_2024-Update
Glyma.10G185100 No alias zinc knuckle (CCHC-type) family protein 0.03 Orthogroups_2024-Update
Glyma.11G008300 No alias zinc knuckle (CCHC-type) family protein 0.05 Orthogroups_2024-Update
Glyma.20G205301 No alias Function unknown 0.04 Orthogroups_2024-Update
HORVU3Hr1G075820.2 No alias circadian clock repression factor *(TZP) 0.03 Orthogroups_2024-Update
HORVU3Hr1G075830.1 No alias circadian clock repression factor *(TZP) 0.03 Orthogroups_2024-Update
LOC_Os01g56780 No alias plus-3 domain containing protein, expressed 0.07 Orthogroups_2024-Update
Potri.008G162100 No alias zinc knuckle (CCHC-type) family protein 0.06 Orthogroups_2024-Update
Potri.010G076700 No alias zinc knuckle (CCHC-type) family protein 0.04 Orthogroups_2024-Update
Sobic.003G313300.1 No alias circadian clock repression factor *(TZP) 0.09 Orthogroups_2024-Update
Solyc09g083390 No alias zinc knuckle (CCHC-type) family protein (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Sopen09g032310 No alias Plus-3 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR004343 Plus-3_dom 796 885
No external refs found!