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  5. Seita.5G343900.1

Seita.5G343900.1


Description : component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG_42_0001797 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G343900.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Bradi2g52070 No alias homolog of yeast autophagy 18 (ATG18) H 0.04 Orthogroups_2024-Update
Brara.A02321.1 No alias component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 Orthogroups_2024-Update
Glyma.13G287000 No alias homolog of yeast autophagy 18 (ATG18) F 0.03 Orthogroups_2024-Update
Potri.005G040300 No alias homolog of yeast autophagy 18 (ATG18) H 0.04 Orthogroups_2024-Update
Sobic.003G320700.1 No alias component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR022175 BCAS3 513 750
No external refs found!