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  5. Seita.5G352700.1

Seita.5G352700.1


Description : regulatory protein *(CYCB) of cell cycle


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G352700.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_33949 No alias g2mitotic-specific cyclin s13-6 0.03 Orthogroups_2024-Update
LOC_Os05g41390 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31810 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
Potri.009G066600 No alias Cyclin B1;4 0.02 Orthogroups_2024-Update
Sopen04g031900 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen06g024200 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen11g001090 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 321 439
IPR006671 Cyclin_N 194 319
No external refs found!