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  5. Seita.5G354800.1

Seita.5G354800.1


Description : alpha-type-7 component *(PAG) of 26S proteasome & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0004188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G354800.1
Cluster HCAA Clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
A4A49_34626 No alias proteasome subunit alpha type-3 0.03 Orthogroups_2024-Update
Bradi2g21510 No alias 20S proteasome alpha subunit G1 0.06 Orthogroups_2024-Update
Cre14.g619550 No alias 20S proteasome alpha subunit G1 0.08 Orthogroups_2024-Update
HORVU5Hr1G076600.2 No alias alpha-type-7 component *(PAG) of 26S proteasome & EC_3.4... 0.03 Orthogroups_2024-Update
Kfl00292_0020 kfl00292_0020_v1.1 (o24362|psa3_spiol : 370.0) Proteasome subunit alpha... 0.02 Orthogroups_2024-Update
Sobic.002G394600.1 No alias alpha-type-7 component *(PAG) of 26S proteasome & EC_3.4... 0.03 Orthogroups_2024-Update
Sobic.003G330500.2 No alias alpha-type-7 component *(PAG) of 26S proteasome & EC_3.4... 0.1 Orthogroups_2024-Update
evm.model.contig_3399.9 No alias (q9lsu0|psa3_orysa : 307.0) Proteasome subunit alpha... 0.05 Orthogroups_2024-Update
evm.model.tig00001466.9 No alias (o24362|psa3_spiol : 336.0) Proteasome subunit alpha... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA 16Dec
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA 16Dec
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
CC GO:0045273 respiratory chain complex II IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 216
IPR000426 Proteasome_asu_N 8 30
No external refs found!