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  5. Seita.5G355300.1

Seita.5G355300.1


Description : MYB class-R2R3 subgroup-18 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G355300.1
Cluster HCAA Clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
A4A49_31893 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
At4g25560 No alias Transcription factor LAF1... 0.05 Orthogroups_2024-Update
At5g62470 No alias Transcription factor MYB96... 0.03 Orthogroups_2024-Update
Brara.C01426.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.01 Orthogroups_2024-Update
Brara.F00557.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.I05267.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Brara.J02324.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G111045 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
GRMZM2G123202 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.03G221900 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.06G178600 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Glyma.12G066000 No alias myb domain protein 59 0.02 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.17G232220 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.19G055800 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
HORVU5Hr1G036900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.02 Orthogroups_2024-Update
MA_69407g0010 No alias "(at2g47460 : 172.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00024333-RA No alias (at1g22640 : 197.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00051767-RA No alias (at4g38620 : 243.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Pp1s420_4V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G201000.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G224800.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G142000.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G159100.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.05 Orthogroups_2024-Update
Sobic.007G039100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G133700.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g010910 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRK4_SALMI) 0.02 Orthogroups_2024-Update
Solyc02g093740 No alias R2R3MYB transcription factor 99 0.02 Orthogroups_2024-Update
Solyc07g053230 No alias R2R3MYB transcription factor 83 0.02 Orthogroups_2024-Update
Sopen02g038370 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g031840 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 43 90
IPR001005 SANT/Myb 96 139
No external refs found!