Seita.5G356900.1

Description : class IV ARF-GAP ARF-GTPase-activating protein

Gene families : OG_42_0001474 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001474_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.5G356900.1
Cluster	HCAA Clusters: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
At1g08680	No alias	ARF GAP-like zinc finger-containing protein ZIGA4...	0.03	Orthogroups_2024-Update
Brara.F00547.1	No alias	class IV ARF-GAP ARF-GTPase-activating protein	0.02	Orthogroups_2024-Update
Glyma.14G129900	No alias	ArfGap/RecO-like zinc finger domain-containing protein	0.03	Orthogroups_2024-Update
Potri.013G068300	No alias	ARF GAP-like zinc finger-containing protein ZIGA4	0.04	Orthogroups_2024-Update
Sobic.004G088400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc10g076990	No alias	Arf GTPase activating protein (AHRD V3.3 - A0A103YN54_CYNCS)	0.05	Orthogroups_2024-Update
Sopen10g028670	No alias	Putative GTPase activating protein for Arf	0.03	Orthogroups_2024-Update
Sopen12g002950	No alias	Putative GTPase activating protein for Arf	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005096	GTPase activator activity	IEA	16Dec
MF	GO:0008047	enzyme activator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004371	glycerone kinase activity	IEP	Predicted GO
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predicted GO
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predicted GO
MF	GO:0005253	anion channel activity	IEP	Predicted GO
MF	GO:0005254	chloride channel activity	IEP	Predicted GO
BP	GO:0006071	glycerol metabolic process	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006821	chloride transport	IEP	Predicted GO
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Predicted GO
BP	GO:0019400	alditol metabolic process	IEP	Predicted GO
MF	GO:0022832	voltage-gated channel activity	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001164	ArfGAP_dom	12	122

External Links

No external refs found!

Seita.5G356900.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation