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  5. Seita.5G358700.1

Seita.5G358700.1


Description : Unknown function


Gene families : OG_42_0003994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G358700.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
136241 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
80365 No alias pentatricopeptide (PPR) repeat-containing protein 0.05 Orthogroups_2024-Update
At3g50420 No alias Pentatricopeptide repeat-containing protein At3g50420... 0.04 Orthogroups_2024-Update
Brara.C04316.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_445076g0010 No alias (at2g13600 : 511.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
Sopen02g034930 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 367 395
IPR002885 Pentatricopeptide_repeat 158 175
IPR002885 Pentatricopeptide_repeat 129 155
IPR002885 Pentatricopeptide_repeat 261 287
No external refs found!