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  5. Seita.5G363100.1

Seita.5G363100.1


Description : alpha-class expansin


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G363100.1
Cluster HCAA Clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Bradi2g53580 No alias expansin A8 0.04 Orthogroups_2024-Update
Glyma.12G150900 No alias expansin 12 0.03 Orthogroups_2024-Update
Glyma.19G024200 No alias expansin A15 0.03 Orthogroups_2024-Update
Kfl00557_g9 kfl00557_g9_v1.1 (at1g12560 : 146.0) Member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Mp3g03890.1 No alias alpha-class expansin 0.05 Orthogroups_2024-Update
Potri.008G057100 No alias expansin A4 0.02 Orthogroups_2024-Update
Pp1s178_63V6 No alias alpha-expansin 1 0.05 Orthogroups_2024-Update
Seita.1G008300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G128800.1 No alias alpha-class expansin 0.05 Orthogroups_2024-Update
Solyc05g007830 No alias expansin12 0.03 Orthogroups_2024-Update
Sopen03g005700 No alias Pollen allergen 0.04 Orthogroups_2024-Update
Sopen10g035900 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 64 149
IPR007117 Expansin_CBD 160 237
No external refs found!