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  5. Seita.5G363700.1

Seita.5G363700.1


Description : Unknown function


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G363700.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
412606 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_10724 No alias ring-h2 finger protein atl33 0.02 Orthogroups_2024-Update
A4A49_29026 No alias ring-h2 finger protein atl60 0.03 Orthogroups_2024-Update
A4A49_29197 No alias ring-h2 finger protein atl73 0.04 Orthogroups_2024-Update
At1g76410 No alias ATL8 [Source:UniProtKB/TrEMBL;Acc:A0A178WF21] 0.04 Orthogroups_2024-Update
At5g05280 No alias RING-H2 finger protein ATL73... 0.02 Orthogroups_2024-Update
Bradi1g06330 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g05840 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g09395 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A02911.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B02994.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01260.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.06G284600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G121100 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G292600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G231900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G069670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G028260.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G081290.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G022830.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU5Hr1G103740.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
LOC_Os09g36500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.1G017500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G275400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G056600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G168900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 89 135
No external refs found!