Seita.5G375500.1


Description : histone *(H2B)


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G375500.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47980 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G058500.1 No alias histone *(H2B) 0.05 Orthogroups_2024-Update
MA_10151143g0010 No alias (at3g45980 : 171.0) Encodes a histone 2B (H2B) protein.... 0.02 Orthogroups_2024-Update
PSME_00041882-RA No alias (at5g22880 : 162.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
Seita.3G216500.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
Sobic.002G210200.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Sobic.003G350100.1 No alias histone *(H2B) 0.06 Orthogroups_2024-Update
Solyc03g071620 No alias Histone H2B (AHRD V3.3 *** K4BHJ2_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 5 115
No external refs found!