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  5. Seita.5G375700.1

Seita.5G375700.1


Description : E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex & component *(Ubc13) of Ubc13-Uev1 E2 ubiquitin-conjugating enzyme complex


Gene families : OG_42_0002092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G375700.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At3g46460 No alias UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960] 0.02 Orthogroups_2024-Update
GRMZM2G085600 No alias ubiquitin carrier protein 7 0.02 Orthogroups_2024-Update
Mp4g07670.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.03 Orthogroups_2024-Update
Solyc09g009720 No alias ubiquitin-conjugating enzyme E2 (AHRD V3.3 *** AT5G59300.1) 0.03 Orthogroups_2024-Update
Sopen05g033030 No alias Ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 12 161
No external refs found!